13 terms
Detection & Segmentation
13
Terms
Term Reference
13 terms| Term | Description | |
|---|---|---|
| Coded Image | The fundamental data representation in StrataQuest for detection results. A coded image is a labeled image where each de... | |
| Deep Learning Nuclei Detection | An advanced nuclei detection engine in StrataQuest that uses deep neural networks (DNNs) to segment individual cell nucl... | |
| Dots Detection Dots (FISH/CISH) Detection Engine | A specialized detection engine for identifying small punctate signals in FISH (fluorescence in situ hybridization) and C... | |
| Engines | The fundamental processing units in StrataQuest. An engine is a configurable algorithm that takes image inputs and produ... | |
| Grow Grow Engine (Global) | A global detection engine that modifies event boundaries by growing, shrinking, or creating ring-shaped measurement mask... | |
| Layers | The organizational unit of analysis in StrataQuest. A layer is a structured pipeline of interconnected engines that toge... | |
| Manual Correction Manual Correction Engine | A post-detection engine enabling manual correction of segmentation errors through four interactive operations: Add (fix ... | |
| Membrane Membrane Detection Engine | A detection engine that identifies cell membrane boundaries using a membrane marker channel, detecting membrane-like str... | |
| Nuclei Detection | The foundational detection engine in StrataQuest that identifies and segments individual cell nuclei in tissue sections.... | |
| Remove Objects Remove Objects Engines | Post-processing engines that remove detected events based on measurement criteria (area, intensity, shape) or border con... | |
| Tissue Detection | An automated engine in StrataQuest that identifies where tissue is present on a scanned slide, distinguishing it from th... | |
| Total Area Total Area Detection Engine | A detection engine that identifies tissue regions as labeled events based on an intensity threshold, combining Otsu bina... | |
| Watershed Watershed Segmentation Engine (Global) | A global detection engine that segments contiguous regions into distinct objects using the watershed algorithm — inter... |