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Image Data Fundamentals

8
Terms

Term Reference

8 terms
TermDescription
Beer-Lambert law The exponential relationship between light absorption, path length, and absorber concentration Transmitted light falls exponentially with stain concentration; converting to optical density makes it linear.
Channel One dimension of a multi-dimensional image One layer of a multi-channel image: red, green, or blue in RGB, or one fluorophore in a fluorescence image.
Foreground / Background The two regions a mask partitions an image into The two parts a binary mask divides an image into: what you want to analyze, and everything else.
Grayscale image Single-channel intensity image One intensity value per pixel and no color: the native form of a fluorescence channel.
Image bit depth 8-bit, 16-bit, 32-bit, and what gets lost between them Bits stored per pixel: 8-bit holds 256 levels, 16-bit 65,536. It sets how finely intensity is quantified.
Look-Up Table (LUT) Maps each input intensity to an output value: false-color display, gamma and contrast curves, and more.
Mask Binary mask A binary image, each pixel on or off, marking the pixels to analyze or the pixels to set aside.
Scaling factor The output multiplier that recurs across arithmetic and filter engines A multiplier on an engine's output that keeps results inside the output image's bit depth.
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